org.jmol.renderbio

Class CartoonRenderer

java.lang.Object

org.jmol.render.ShapeRenderer

org.jmol.render.MeshRenderer

org.jmol.renderbio.BioShapeRenderer

org.jmol.renderbio.StrandsRenderer

org.jmol.renderbio.RocketsRenderer

org.jmol.renderbio.CartoonRenderer

public class CartoonRenderer
extends RocketsRenderer

Field Summary

Fields

Modifier and Type	Field and Description
private boolean	ladderOnly
(package private) javajs.util.P3	ptConnect
(package private) javajs.util.P3i	ptConnectScr
private boolean	renderAsRockets
private boolean	renderEdges
private javajs.util.P3[]	ring5Points
private javajs.util.P3i[]	ring5Screens
private javajs.util.P3[]	ring6Points
private javajs.util.P3i[]	ring6Screens

Fields inherited from class org.jmol.renderbio.RocketsRenderer

cordMidPoints, newRockets, renderArrowHeads, tPending

Fields inherited from class org.jmol.renderbio.StrandsRenderer

baseStrandOffset, strandCount, strandSeparation

Fields inherited from class org.jmol.renderbio.BioShapeRenderer

bsVisible, cartoonsFancy, colixBack, colixes, colixesBack, controlPoints, controlPointScreens, isCarbohydrate, isNucleic, isPass2, leadAtomIndices, mads, monomerCount, monomers, ribbonBottomScreens, ribbonTopScreens, structureTypes, wingVectors, wireframeOnly

Fields inherited from class org.jmol.render.MeshRenderer

antialias, bsPolygons, bsPolygonsToExport, diameter, exportPass, frontOnly, haveBsDisplay, imageFontScaling, isGhostPass, isTranslucent, isTranslucentInherit, latticeOffset, mesh, meshSlabValue, needTranslucent, normixes, pt1f, pt1i, pt2f, pt2i, pt3i, renderLow, scalePixelsPerMicron, screens, selectedPolyOnly, thePlane, transformedVectors, vertexCount, vertices, volumeRender, width

Fields inherited from class org.jmol.render.ShapeRenderer

colix, exportType, g3d, isExport, mad, madBeg, madEnd, madMid, modelSet, myVisibilityFlag, shape, shapeID, viewer

Constructor Summary

Constructors

Constructor and Description
CartoonRenderer()

Method Summary

Modifier and Type	Method and Description
protected void	renderBioShape(BioShape bioShape)
private void	renderCartoonRockets()
private void	renderLeontisWesthofEdges(NucleicMonomer nucleotide, short thisMad)
(package private) void	renderNucleic()
private void	renderNucleicBaseStep(NucleicMonomer nucleotide, short thisMad, javajs.util.P3i backboneScreen, javajs.util.P3 ptConnect)
private void	renderRing5()
private void	renderRing6()
protected void	renderRockets()
private void	renderTriangle()

Methods inherited from class org.jmol.renderbio.RocketsRenderer

buildArrowHeadBox, buildBox, calcRopeMidPoints, drawArrowHeadBox, drawBox, isSheet, renderCone, renderPending, renderSpecialSegment

Methods inherited from class org.jmol.renderbio.StrandsRenderer

renderStrands, renderStrandShape, setStrandCount

Methods inherited from class org.jmol.renderbio.BioShapeRenderer

adjustCartoonSeamNormals, calcScreenControlPoints, calcScreens, getLeadColix, getLeadColixBack, getScreenControlPoints, isHelix, render, renderHermiteArrowHead, renderHermiteConic, renderHermiteCylinder, renderHermiteRibbon, setBioColix

Methods inherited from class org.jmol.render.MeshRenderer

checkNormals, drawLine, drawTriangle, exportSurface, isPolygonDisplayable, render2, render2b, renderMesh, renderMesh2, renderPoints, renderTriangles, setColix

Methods inherited from class org.jmol.render.ShapeRenderer

initRenderer, renderShape, setViewerG3dShapeID

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

renderAsRockets

private boolean renderAsRockets

renderEdges

private boolean renderEdges

ladderOnly

private boolean ladderOnly

ptConnectScr

javajs.util.P3i ptConnectScr

ptConnect

javajs.util.P3 ptConnect

ring6Points

private final javajs.util.P3[] ring6Points

ring6Screens

private final javajs.util.P3i[] ring6Screens

ring5Points

private final javajs.util.P3[] ring5Points

ring5Screens

private final javajs.util.P3i[] ring5Screens

Constructor Detail

CartoonRenderer

public CartoonRenderer()

Method Detail

renderBioShape

protected void renderBioShape(BioShape bioShape)

Overrides:

renderBioShape in class RocketsRenderer

renderNucleic

void renderNucleic()

renderRockets

protected void renderRockets()

Overrides:

renderRockets in class RocketsRenderer

renderCartoonRockets

private void renderCartoonRockets()

renderNucleicBaseStep

private void renderNucleicBaseStep(NucleicMonomer nucleotide,
                                   short thisMad,
                                   javajs.util.P3i backboneScreen,
                                   javajs.util.P3 ptConnect)

renderLeontisWesthofEdges

private void renderLeontisWesthofEdges(NucleicMonomer nucleotide,
                                       short thisMad)

renderTriangle

private void renderTriangle()

renderRing6

private void renderRing6()

renderRing5

private void renderRing5()