org.jmol.exportjs

Class CartesianExporter

java.lang.Object

org.jmol.exportjs.Exporter

org.jmol.exportjs.CartesianExporter

Direct Known Subclasses:

JSExporter

public abstract class CartesianExporter
extends Exporter

Field Summary

Fields

Modifier and Type	Field and Description
protected javajs.util.A4	viewpoint

Fields inherited from class org.jmol.exportjs.Exporter

aperatureAngle, appletName, backgroundColix, cameraDistance, cameraPosition, center, commandLineOptions, degreesPerRadian, depthZ, exportType, fileName, fixedRotationCenter, g3d, isToFile, jmolRenderer, lineWidthMad, nBytes, out, output, privateKey, referenceCenter, scalePixelsPerAngstrom, screenHeight, screenWidth, slabZ, tempA, tempP1, tempP2, tempP3, tempV1, tempV2, tempV3, viewer

Constructor Summary

Constructors

Constructor and Description
CartesianExporter()

Method Summary

Modifier and Type	Method and Description
(package private) void	drawAtom(Atom atom)
(package private) void	drawCircle(int x, int y, int z, int diameter, short colix, boolean doFill)
(package private) void	drawCylinder(javajs.util.P3 ptA, javajs.util.P3 ptB, short colix1, short colix2, byte endcaps, int mad, int bondOrder)
(package private) boolean	drawEllipse(javajs.util.P3 ptCenter, javajs.util.P3 ptX, javajs.util.P3 ptY, short colix, boolean doFill)
(package private) void	drawPixel(short colix, int x, int y, int z, int scale)
(package private) void	fillConeScreen(short colix, byte endcap, int screenDiameter, javajs.util.P3 screenBase, javajs.util.P3 screenTip, boolean isBarb)
(package private) void	fillCylinderScreen(short colix, byte endcaps, int screenDiameter, javajs.util.P3 screenA, javajs.util.P3 screenB, javajs.util.P3 ptA, javajs.util.P3 ptB, float radius)
(package private) void	fillCylinderScreenMad(short colix, byte endcaps, int mad, javajs.util.P3 screenA, javajs.util.P3 screenB)
(package private) void	fillEllipsoid(javajs.util.P3 center, javajs.util.P3[] points, short colix, int x, int y, int z, int diameter, javajs.util.M3 toEllipsoidal, double[] coef, javajs.util.M4 deriv, javajs.util.P3i[] octantPoints)
(package private) void	fillSphere(short colix, int diameter, javajs.util.P3 pt)
protected void	fillTriangle(short colix, javajs.util.P3 ptA, javajs.util.P3 ptB, javajs.util.P3 ptC, boolean twoSided, boolean isCartesian)
protected javajs.util.P3	getCameraPosition()
protected int	getCoordinateMap(javajs.util.T3[] vertices, int[] coordMap, BS bsValid)
protected javajs.util.P3	getModelCenter()
protected int[]	getNormalMap(javajs.util.T3[] normals, int nNormals, BS bsValid, javajs.util.List<String> vNormals)
protected abstract void	outputCircle(javajs.util.P3 pt1, javajs.util.P3 pt2, float radius, short colix, boolean doFill)
protected abstract void	outputCone(javajs.util.P3 ptBase, javajs.util.P3 ptTip, float radius, short colix)
protected abstract boolean	outputCylinder(javajs.util.P3 ptCenter, javajs.util.P3 pt1, javajs.util.P3 pt2, short colix1, byte endcaps, float radius, javajs.util.P3 ptX, javajs.util.P3 ptY, boolean checkRadius)
protected abstract void	outputEllipsoid(javajs.util.P3 center, javajs.util.P3[] points, short colix)
protected void	outputFace(int[] is, int[] coordMap, int faceVertexMax)
protected void	outputIndices(int[][] indices, int[] map, int nPolygons, BS bsPolygons, int faceVertexMax)
protected abstract void	outputSphere(javajs.util.P3 ptAtom2, float f, short colix, boolean checkRadius)
protected abstract void	outputTriangle(javajs.util.P3 pt1, javajs.util.P3 pt2, javajs.util.P3 pt3, short colix)
private void	setTempPoints(javajs.util.P3 ptA, javajs.util.P3 ptB, boolean isCartesian)

Methods inherited from class org.jmol.exportjs.Exporter

drawFilledCircle, drawSurface, finalizeOutput, getTriad, initializeOutput, output, output, outputFooter, outputHeader, outputSurface, outputVertex, outputVertices, plotImage, plotText, round, round, setRenderer, setTempVertex

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

viewpoint

protected javajs.util.A4 viewpoint

Constructor Detail

CartesianExporter

public CartesianExporter()

Method Detail

getModelCenter

protected javajs.util.P3 getModelCenter()

getCameraPosition

protected javajs.util.P3 getCameraPosition()

setTempPoints

private void setTempPoints(javajs.util.P3 ptA,
                           javajs.util.P3 ptB,
                           boolean isCartesian)

getCoordinateMap

protected int getCoordinateMap(javajs.util.T3[] vertices,
                               int[] coordMap,
                               BS bsValid)

getNormalMap

protected int[] getNormalMap(javajs.util.T3[] normals,
                             int nNormals,
                             BS bsValid,
                             javajs.util.List<String> vNormals)

outputIndices

protected void outputIndices(int[][] indices,
                             int[] map,
                             int nPolygons,
                             BS bsPolygons,
                             int faceVertexMax)

outputFace

protected void outputFace(int[] is,
                          int[] coordMap,
                          int faceVertexMax)

Parameters:

is -

coordMap -

faceVertexMax -

outputCircle

protected abstract void outputCircle(javajs.util.P3 pt1,
                                     javajs.util.P3 pt2,
                                     float radius,
                                     short colix,
                                     boolean doFill)

outputCone

protected abstract void outputCone(javajs.util.P3 ptBase,
                                   javajs.util.P3 ptTip,
                                   float radius,
                                   short colix)

outputCylinder

protected abstract boolean outputCylinder(javajs.util.P3 ptCenter,
                                          javajs.util.P3 pt1,
                                          javajs.util.P3 pt2,
                                          short colix1,
                                          byte endcaps,
                                          float radius,
                                          javajs.util.P3 ptX,
                                          javajs.util.P3 ptY,
                                          boolean checkRadius)

outputEllipsoid

protected abstract void outputEllipsoid(javajs.util.P3 center,
                                        javajs.util.P3[] points,
                                        short colix)

outputSphere

protected abstract void outputSphere(javajs.util.P3 ptAtom2,
                                     float f,
                                     short colix,
                                     boolean checkRadius)

outputTriangle

protected abstract void outputTriangle(javajs.util.P3 pt1,
                                       javajs.util.P3 pt2,
                                       javajs.util.P3 pt3,
                                       short colix)

drawAtom

void drawAtom(Atom atom)

Specified by:

drawAtom in class Exporter

drawCircle

void drawCircle(int x,
                int y,
                int z,
                int diameter,
                short colix,
                boolean doFill)

Specified by:

drawCircle in class Exporter

drawEllipse

boolean drawEllipse(javajs.util.P3 ptCenter,
                    javajs.util.P3 ptX,
                    javajs.util.P3 ptY,
                    short colix,
                    boolean doFill)

Specified by:

drawEllipse in class Exporter

drawPixel

void drawPixel(short colix,
               int x,
               int y,
               int z,
               int scale)

Specified by:

drawPixel in class Exporter

fillConeScreen

void fillConeScreen(short colix,
                    byte endcap,
                    int screenDiameter,
                    javajs.util.P3 screenBase,
                    javajs.util.P3 screenTip,
                    boolean isBarb)

Specified by:

fillConeScreen in class Exporter

drawCylinder

void drawCylinder(javajs.util.P3 ptA,
                  javajs.util.P3 ptB,
                  short colix1,
                  short colix2,
                  byte endcaps,
                  int mad,
                  int bondOrder)

Specified by:

drawCylinder in class Exporter

fillCylinderScreenMad

void fillCylinderScreenMad(short colix,
                           byte endcaps,
                           int mad,
                           javajs.util.P3 screenA,
                           javajs.util.P3 screenB)

Specified by:

fillCylinderScreenMad in class Exporter

fillCylinderScreen

void fillCylinderScreen(short colix,
                        byte endcaps,
                        int screenDiameter,
                        javajs.util.P3 screenA,
                        javajs.util.P3 screenB,
                        javajs.util.P3 ptA,
                        javajs.util.P3 ptB,
                        float radius)

Specified by:

fillCylinderScreen in class Exporter

fillEllipsoid

void fillEllipsoid(javajs.util.P3 center,
                   javajs.util.P3[] points,
                   short colix,
                   int x,
                   int y,
                   int z,
                   int diameter,
                   javajs.util.M3 toEllipsoidal,
                   double[] coef,
                   javajs.util.M4 deriv,
                   javajs.util.P3i[] octantPoints)

Specified by:

fillEllipsoid in class Exporter

fillSphere

void fillSphere(short colix,
                int diameter,
                javajs.util.P3 pt)

Specified by:

fillSphere in class Exporter

fillTriangle

protected void fillTriangle(short colix,
                            javajs.util.P3 ptA,
                            javajs.util.P3 ptB,
                            javajs.util.P3 ptC,
                            boolean twoSided,
                            boolean isCartesian)

Specified by:

fillTriangle in class Exporter